This web server predicts motional amplitudes and timescales of proteins from an average protein structure (PDB) as input. The web server returns crystallogragphic B-factors for all heavy atoms, backbone N-H and side-chain methyl (CH3) group S2 order parameters, and the dynamic timescales of every protein loop denoted as fast, slow, or static. It provide both intuitive visualization and result download.
The input PDB file can not have any missing residue or heavy atom.
Visualization of the results may not work properly for PDB with multiple chains (to be solved later).
Click to download all results in a tar file.
AcknowledgementThis web server and the research that led to it is supported by the National Science Foundation (Grants No. MCB-0211512, MCB-0507444, MCB-0621482, and MCB-0918362).
*This information is only used for the compilation of our webserver usage data.
This server is last updated at November 08 2022 17:50:26.